I guess I figured that out. This happens when SE mod is also activated, sorry for confusion. For SE compatibility, some fuel types have been changed:
if mods["space-exploration"] and krastorio.general.isVersionGreaterEqualThan(mods["space-exploration"], "0.3.0") then
-- Chaning the name of the antimatter reactor fuel for not be the same of the antimatter reactor of SE
data.raw.item["empty-antimatter-fuel-cell"].localised_name = { "item-name.empty-singularity-fuel-cell" }
data.raw.item["charged-antimatter-fuel-cell"].localised_name = { "item-name.charged-singularity-fuel-cell" }
I'm not sure why it was changed like that, but it is REALLY confusing