Currently running 1.0.23
Mod List: https://imgur.com/a/cqugzlU
Krastario 2 was running since the start of the game

When throwing anti-creep capsule, any ores that is blended with creep is deleted. This makes the capsule in my deathworld KS2 very bad, as I can't afford to have it delete so much ore when I use it as creep is everywhere :(

Otherwise, thanks fellas for such a great mod! I love it :D

Does this happen on a new save? I used the map editor to place some resources over creep and this didn't happen.

It does happen on a new save. I started a new save with up ores and biters to maximum (better simulates late game deathworld far away from the starting location), revealed the map, threw a capsule, and the following occurred to an untouched ore patch: https://i.imgur.com/PO0uZcD.png

You may have to look a bit further away from spawn, I'm not sure if that matters, but it does happen.

Well, I just rewrote the entire logic for the creep virus, so hopefully that will have fixed your issue.