I'd do some of this myself, but I'm not comfortable with touching this codebase.
The xy-research-data subgroup was implemented for the science tab as krastorio-research-data, and both planetaris and the outer rim is using that now by default. it also comes with an extra bit of maraxsis compat.
You can also use the science-tab-always-move-labs setting to move every lab to the science tab now. That is a good idea to have it like that.
This also filters the moshine supercomputer, because it does not use science packs, so it is not a related item.
The entire workshop science compat layer is also redundant as now that mod is just compatible with krastorio out of the box. The tech card from this mod was taken, together with the existing license for those assets. The tech card's spread is a little bit odd, but I think I like it.
The entire outer rim compat layer should also just be deleted. Also including the license in the mod for those assets, even if they were modified to match with my own intended design. This is the bit I'm really not comfortable touching, as it is woven together with the compat for Secretas and Paracelsin, and that should still stay, but remain partially disabled when the outer rim is installed. Don't override science packs.
It actually translates some of my design intention into the krastorio compat instead of being something generic, up to including what was technically scrapped content. :)
Whoever would be working on this can also join here. We can see what we can do about it to lower the load on this mod, as most of the devs for the mods that have compatibility here are there as well, and can be reached out.
https://discord.gg/53jAMP5gZV