I suspect the update today may be overriding a change in Astroponics, not sure if thats possible but its the only thing I can think of from my mod list that seems marginally related. My guess is something having to do with Zen Garden compatibility. Or maybe something else about astroponics compatibility.
https://mods.factorio.com/mod/astroponics/changelog
New setting when Early Agriculture is not installed: "More wood" buffs Tree astroponics yields from 4 to 10 wood.
However since updating a set of mods including this one, astroponics has reverted to yielding 4 wood on the recipe, which is killing my ships. My mod list does have astroponic 1.8 which includes the buff.
Hopefully Im correct that this is the conflict and the change or fix is easy, otherwise I can try investigating further.