I definitely went overboard lol, but yes, I forgot to include Crushing Industry in my original post. Just checked and your fix has worked, the crusher can now be made using gold plates, wooden gears, and stone bricks, with the copper, engines and stone recipe also available for Nauvis. Thanks for getting that so fast!
Everything else seems to work just fine, though I am dreading making large scale wood production on every planet. I assume the dessication furnace really doesnt have a use anywhere else as the stromatolite remnant is Lignumis exclusive? I'll keep an eye and see if anything else crops up, but can I just saw you did a great job with this mod. It certainly slows down the early game but is super unique!