I'm not sure if this helps you, but when I tested, I had ONLY Rubia and Shattered planet (and there dependents) enabled. The "ske_rubia_tech" does exist, and it does have a valid item ID target for "yeet-ske_heb_248". It sounds to me like you might have another mod installed that deletes "ske_heb_248" or "yeet-ske_heb_248" (since Rubia auto-generates the yeet item based on items and technologies that exist).
CPU_Blackheart is aware, but is primarily working on Vesta. You may want to reach out to him via the Foundry discord if you want more help with this.
Good luck and godspeed.