Looking at the issue and how the loader upgrade is managed in the code, it means you destroyed and/or replaced the loader at some point, which breaks some relations stored in the mod data.
Does changing the yellow loader direction change the direction of the associated loader on the other platform as well ?
If you really didn't do anything (except using the other mods), can you share your mod list / your save ? Because i'm clearly not able to reproduce the issue unless I replace the loader using the editor mode.