I'm playing Razi Protocol, which includes the Condensing Agricultural Tower mod, and when I deconstruct the trees grown from tree seeds, the game throws an error that I assume is due to the fact that these trees have a water yield:

The mod Quantum Fabrication (2.12.4) caused a non-recoverable error.
Please report this error to the mod author.

Error while running event quantum-fabricator::on_marked_for_deconstruction (ID 28)
quantum-fabricator/scripts/qs_utils.lua:24: attempt to index field '?' (a nil value)
stack traceback:
quantum-fabricator/scripts/qs_utils.lua:24: in function 'add_to_storage'
quantum-fabricator/scripts/qs_utils.lua:79: in function 'add_to_player_inventory'
quantum-fabricator/scripts/debuilder.lua:213: in function 'process_mining'
quantum-fabricator/scripts/debuilder.lua:149: in function 'instant_deforestation'
quantum-fabricator/scripts/events.lua:351: in function <quantum-fabricator/scripts/events.lua:326>

Fixed, but only for 2.1 Factorio. Sorry, but that's my personal stance due to Wube keeping it experimental for 3 bloody months, if you want to keep playing on 2.0 you'll have to edit the fix yourself:
scripts / debuilder.lua -> function process_mining -> change 'type = "item"' to 'type = item.type' (with no ')

Awesome, thanks! No worries about only updating for 2.1, thanks for posting the fix I can do myself. :)