Sorry but not the way it made for you.
Considering the item flow as Ctrl+C marks the start point and Ctrl+V the ending point, if you copy things from assembly to the chest it'll copy the content of the assembler into the chest, since that's the default "copy-paste" design. Alternatively, if you copy things from the chest into the assembler, you would either:
1) try to find a recipe that matches most of the contents of the chest to autoproduce something.
2) clear the assembler recipe listing if the chest is empty.
Since it copies content from A to B that would be the logical flow of the action for me.
Your idea is counter intuitive because the above is the default copy-paste behavior, since it was invented for computers but I also understand the way you pictured the flow: You set A and B as fixed points where A will always be the source and B will always be the destination, A being Assembler or furnace or chemical plant or anything that produces something and B will always be the IN chest. The starting point of the Ctrl+C will determinate the logic flow instead of determinating the starting point of the copy content, meaning if you start the flow with the assembler, it'll mean A Output into B, the other way, B Output into A.
Takes a while to get used to that but its not wrong, its just different. If you document that, you would reduce the ammount of ppl bugging you asking about this lol