Customizations with mods, it can solve a problem with situation when mods interferences on complexity. Why purple science is hardest now?
You need prod modules 1, 30x rails and el.furnaces
First one - you need silicon factory for making wafers (mine stone, smelt stone into bricks, crush it into sand and from sand make silicon using large amount of acid). After that you can produce adv circuits with plastics. So, very wide recipe. Is fun, and ok in small scale. In larger scale, factory making only wafers and adv circuits can suck up nera 2GW of power and enormous amount of stone. But, it can be solved and fit to factorio.
Second - rails, devs that add rails in this science - add this only for push players into larger logistic problems that encouraging them into divide factory into smaller ones. is ok, but amount of consumed rails is large but can be handled as usual.
Third one, Electric Furnace - Costly, slowly crafted machine as part for good automated factory producing steel, adv circuits and stone. Is Basically OK. Now, when you add some new metals - situation with el. furnaces start complicate input (1-3 intermediates setup is easy, 4 - 5 intermediates making some problems with fitting them with beacons, and 7-8 intermediates is very hard when you using belt logistic OR push you into using a bots. I pick last one, because belts have to small throughput but using bots to carry bricks is ok?
An LDS problem is similar. amount of intermediates, very wide usage for LDS making problem with scale.
So, I give you some idea. Make compounds of your metal materials or alloys. For example You can make Zirconed Copper plates and add receipe for this and other crafting. Using that intermediate recipes all crafting can be less enforcing logistic but - like factorio devs - encourage players into diversification of sourcing factory. Maybe next your mod can be about "Smeltery"? when you use all your metals as part of alloy producing. I know about limitations of furnaces, but some modern can bypass this problem. For example, Bioindustries have Terraform that is not a typical assembler.