I have no idea what mod conflict caused it or if it was just something in this mod, but between this, its requirement, Space Spidertron, Spidertron Tiers (community updates), Vehicle Grids, Equipment Gantry, Space Exploration and who knows what else out of my list, the vanilla Spidertron recipe got removed from my research until I turned this mod off. I don't really expect a fix because it could be a million different things without knowing what mod caused it, and without an error logged that would be a pain to track down unless someone with a smaller list encounters it too; personally I suspect either Tiers or SE since the first for sure and I think the second move the base spidertron research around in the tree (and i had Tiers' option to move it earlier in the tree on).
I just want to share the WORKAROUND I found for anyone else who encounters this: Turn off Spiderling in Mod Settings. I was able to re-enable the mod and keep the spidertron recipe around by disabling this mod's Spiderling.