Ahh, that makes a lot of sense, and it does look like it should be an incredibly simple fix. I've never actually noticed that issue in-game, because I always set my filters manually, by dragging and dropping the item directly onto the hotbar lol. I guess I just assumed it was supposed to show all of the items in the game, since that's the way it's always appeared to me... but maybe that's because I've always run this mod when I play lmao.
I'll be able to fix this later tonight, thanks for the solution!