Dunno what that mod is. Despite this, maybe you can fix this by disabling the "Recipe selection" setting, remove the modules, then reset the mod config.
This because my mod allows you to decide which recipe you want to apply to a furnace, by converting it in an assembling machine.
But to do this I first need to replace all the furnaces on the world you're playing with assemblers.
I'll see if I can take the modules in consideration while replacing the furnaces, but for now you can do this thing to resolve the issue.
