yeah 0.9.9 seems to break a number of mods (Paracelsin, Muluna, Igrys, Tenebris Prime), because you switched promethium-science-pack to research_trigger instead of science pack based (you require change_game_data.move_promethium_tech in data.lua line 15, which in turn redefines promethium-science-pack).
Those mods add additional science packs to unlock promethium-science-pack and try to access https://lua-api.factorio.com/latest/prototypes/TechnologyPrototype.html#unit, which isn't set anymore (see e.g. https://github.com/AndreusAxolotl/Paracelsin/blob/984406576404aa9b5dddce117c6824ceac38fe6a/prototypes/technology.lua#L582, crash because unit is nil).
Now, all those mods could check whether promethium-science-pack is still not research_triggererd, but as I have four mods that break because of the change in Nexis 0.9.9 I wonder whether you go too far in redefining the science pack in such a significant matter. Or, you can of course mark those other mods as incompatible.
Nevertheless, I'll report that in Muluna, too (I don't want to spam the other mods with bug reports, too, as of now), since they're pretty active and maybe have some idea how to cope with that...
Obviously, for now, I'll disable Nexus...
Edit: see here https://github.com/nicholasgower/planet-muluna/issues/317