Yes, those are all internal items used/produced by the mod.
The "utility" projectiles are used entirely for scripting, and are deliberately unobtainable - the infinity chest is to make sure of this - they are some form of ammo (cannon shells maybe), just because the scripts producing them always produces an item.
The multiple atomic detonations are for the different cores. These are used as markers to allow the nuclear tests.
I hadn't considered the mess they would all make in infinity chests, but they are all kind of necessary for bits of functionality in the mod.
I guess I should put all of this under the utilities category (or whatever the infinity chest and such are from).