So I added subsurface to a dedicated server I am hosting. Running Space Age. The drill has been going for 10 hours on 2 different planets. And has yet to make the enterance. I can see the sublevel maps are there on the map function. But when I go to them there just blackness. And there is no way to enter. I cannot place any other objects related to the mod.
SO I had a theory and it checked out. This is the mod that caused the conflict. sonaxaton-infinite-resources It changes the resources to % and that caused the miner to not do its job. Everything is working as intended now. And using a mod that replaces the resources when they are depleted does work with Subsurface.