EDIT: See my second post, leaving this one here for the record.
Currently you can't choose what a chest becomes unless you're building it manually, or copying from an existing one, maybe instead of opening a selection window, the choice should be in the chest UI itself? The way it is now adds extra steps for the hyper automated playstyle that Space Exploration requires and players who prefer a hands-off playstyle in general once robots are in.
Also the description of the mod caused some issues for me:
-Chests can be copy/pasted to change generic chests into a normal logistic chest
-Normal logistic chests can be copied and pasted onto generic chests
I was not able to copy/paste chests in any configuration
-Fast replacing a generic chest on an original logistic chest will replace it with the corresponding generic replacement
This only works manually, ordering robots to replace a normal logistic chest will replace it with an unconfigured generic chest
Also this made me realize that it's pretty weird that you can fast replace a generic chest with a normal logistic chest, who would really want to do that if the mod is working properly? So a fast solution might be just immediately changing the generic chest into that type of chest in thiat particular case, but this would still be less ideal than changing the chest type from anywhere or just choosing it when it's still a ghost.