I get the error as well, my mod list is huge and I'm still trying to investigate exactly what's going on, but the error I receive is from Reverse Factory and it says smart-rocket-silo-red doesn't exist, that it was removed by CircuitControlledSilo; and on trying to figure out why it's being removed, turns out something is stopping rocket-part from getting a stacked version and therefore no StackedRecipe-rocket-part is being made either.
My mod setup is not Krastorio 2, but rather a "complete" Bobs/Angels/MadClown pack including a bunch I have personally fixed for 1.0.
EDIT: I'm sorry I said the error was referencing deadlock_stacked_recipes but it was in fact CircuitControlledSilo, I was looking in DSR to see if I could figure out why rocket-part wasn't been stacked but so far I've been unable to track it.