I didn't see a problem what setting did you use.
I did 100 spent uranium fuel rod (500 Gj) and i got after recycle 53 uranium fuel rod (265Gj) + 3 neptunium fuel cell (3Gj) + 7 MOX fuel rod (52.5Gj) for 320.5Gj and some left-over items
the energy lost is in fact not much (in ideal world as only the U235 that split releze energy and some of this energy is used by the U238 to become Pu and then be able to split.
As example in 100 U you have 5 U235 and 2.5U235 will split and give energy in the end you have left with 75U (72.5U238 and 2.5U235)+20Pu(from U238 that got transform) and 5% of fission product.