Yeah I see now. The base game contains two water tiles "water-mud" and "water-shallow", but by default these are not used in terrain generation and cannot be landfilled. One of the mods, I haven't looked at which one yet, adds these tiles to the allow list for landfill, probably because it uses it in terrain generation.
When Space Age is installed these two tiles can also be landfilled.
I'll make an update that always adds these two tiles regardless of whether Space Age is installed, as the tiles are in the base game tileset.