Putting a higher quality item into a memory unit clears the quality on the stored item.
Given Quality compatibility is experimental with SE currently, I'd understand it not being tested much. Also could be accepted as flavor - storing bulk quantities by converting them to energy loses quality for various technobabble reasons!
Still, if its not to be fixed, a warning it will reset quality would be nice. I suppose that means they currently work as very expensive quality reset options, too, hmm.