Yeah, the stacked vanilla items are getting modified late by Bob's changes to pollution modifiers. I don't want to add workarounds to the base mod when possible for simplicity's sake, when we can just do something like this...
if data.raw.item["deadlock-stack-coal"] then
data.raw.item["deadlock-stack-coal"].fuel_emissions_multiplier = data.raw.item["coal"].fuel_emissions_multiplier
end
-- (and another for solid fuel and any others others Bob modifies)
... run after Bob's modifications to the vanilla items run, probably just in data-final-fixes with an optional dep on bobplates, which makes the changes, to ensure the changes are synced to the stacked item after they're finalized. OhChirpy, you could add this to your mod or I can add it to this one; I figure most people using Deadlock+Bob's probably have both mods installed.