Alright, seems like the issue is between this mod and Exotic Space Industries. There is indeed a technology present in the save you sent me "Fluid mining" that should have a research trigger (researched when 500 steam is created). With your current settings, Exotic Space Industries is setting it to have a science recipe with a few science packs, including Computer-age pack, so it's a soft lock. (It's also doing the same to Graphite processing, which is supposed to have a trigger on mining graphite)
You will have to go into mod startup settings for Exotic Industries and toggle "Triiger tech research in regular way" (it's spelled that way in the mod). This should allow the research triggers, instead of creating the soft lock. Then you'll just need to produce 500 steam to unlock the tech to mine graphite.
I'm not sure if there are further softlocks, please let me know if you find any.