That sounds odd, Steam engine 1 should still be there, the only time it isn't is when it's on steam power research, IF you have "Burner phase" turned on in Bobtech... it is turned off by default due to compatabillity issues with AAI Industry, so unless you turn it on specifically, it's turned off.
I even did a test to make sure, turning off burner phase, and steam engines are just buildable from the start
Turn on Burner phase and it's locked behind Steam engine 1 technology. Build a burner lab to research it.