You'd need to talk to Angel about that, apparently he removes fuel values on purpose.
I have no idea why he does, and honestly, the fact that he removes it from liquid fuel, and no from crude oil is really strange (because if I were doing such a thing, I'd remove it from everything except liquid fuel).
it also messes with Bob's metals, chemicals and intermediates intended flow, because you're supposed to get rid of hydrogen (steel requires Oxygen, which you get by doing Electrolysis, which also gives you hydrogen) by burning it in one of the many new "oil burning" entities, I usually use an oil boiler (I know, hydrogen is a gas, not an oil, but has a fuel value. someone suggested I rename things) but with angels, you pretty much have no choice but to void it.