Ok, I will take a look at this.
I think that having iron gears was intended to match the original cargo ship recipe, but after some thinking and playtesting and based on how real life ships work, I think locking automated ship transport behind the steel tech makes sense while having the free ship being iron only makes sense. I think I will change it to steel gears in the next update. In that case, ports should also use steel beams.
I think using buoys in the port is a bit wonky. Train stations in IR3 require the train signal, so I made ports require buoys to match that symmetry. I might move ports to be in the same research as buoys in that case in the next update.
Thanks for the report.