I HIGHLY recommend the BurntExtractor mod for this as that what it does for nuclear reactor type fuels: "https://mods.factorio.com/mod/BurntExtractor"
Also re-balance update adding more uranium output pending ;)
So i installed that mod, "BurntExtractor" and it still wont take the uranium out of the MK9s. Is there something special im missing here? Like a certain building/inserter i build to empty the slot?