Hi, I'm testing the behavior described but I'm not able to reproduce the bug.
I placed 50 solar walls, shoot 1 until damaged, then shoot another until destruction. It shows logistic request to repair and to rebuild (yellow icons). On the power panel there's no red X, only the remaining 49 Solar Walls (see image in the link here: https://imgur.com/a/O7lYMT4). Then I allow bots to repair: the yellow badges disappears after they're dealt with and the production stats goes back to 50 solar walls (49 + 1 rebuilt). I coouldn't find any red X.
Could you provide a save or describe how to reproduce the supposed bug? If there are many entities/ghosts/logistic requests on the map, it could simply be a delay while the game engine clears all the events and the bot queue.