I cant get the recipes to work, based on other discussions on here, as well as picture 2 and 3 under the tab information here on the mod portal, I am supposed to be able to specify quality of the recipe, i.e. require green quality for blue quality recipe. However I do not get that choice of selecting quality of ingredients (bottom left of picture 2).

I have been able to reproduce this with only the editor extension mod enables.
mod version: 1.2.11
factorio version: 2.0.66

I'll look into this when I have time. Does this affect only the upgrade machines added by this mod, or are you unable to specify the quality of recipes for other machines as well?