I'm having the same issue with these settings:
Bias: Best
Chaos: Ultimate
Logistics: More
Production: More
Military: More
Miscellaneous: More
Technology prereqs: off
Recipe ingredients: on
Science recipes only: off
Recipe unlocks: off
Duplicate unlocks: off
Items: on
Percent of items randomized: 100
Item randomization attempts: 10
Unified randomization attempts: 10
All unified options: on
Unified technology delinearization: Some
The rest is off with the safeguarded algorithm
Mods:
Base mod
Elevated rails
Quality
Recycler
Space age
Artisinal Reskins: Bob's Assets
Blueprint Shotgun
Bullet Trails
Disco Science
Even Distribution
exfret's Randomizer
Factorio Library
Milestones
Rate Calculator
Squeak Through 2
(edit: actually its not the same thing, the issue Im having is that everything that you normally unlock (without the randomizer) after green science doesnt have their crafting recipes randomized, except the items that were already randomized being replaced with their randomized versions)
(edit 2: Turning recipe unlocks on and unified recipe unlocks off seems to fix the issue)