I can confirm that adding a deepcopy does fix the graphical problem.
For anyone wanting to patch this locally, replace this line of prototypes/entities/buildings/advanced-centrifuge.lua (around line 12)
local pipe_picture = require("__base__.prototypes.entity.assembler-pictures").assembler3pipepictures
with
local pipe_picture = util.table.deepcopy(require("__base__.prototypes.entity.assembler-pictures").assembler3pipepictures)