That is a slightly different error. I assume the error message is "Gui element with name tral_alert_frame already present in the parent element.". If so, it was introduced by my fix, but I am not quite sure why. Would you be willing to share your save file (PM me on the forums if you don't want to share it publicly). I think I can fix the problem without it, but would still like to understand exactly how this happens.
Edit: 0.4.5 fixes this (again, for real this time, fingers crossed :D). Would still like to have a look at your save before that error, if you are willing to share.