Unfortunately, this mod overwrites and overhauls too much vanilla content to properly balance with mini machines.
I may look at compatibility with this mod in the future, if it ever takes off (which I really hope it does; it's a very interesting mod), but can't justify making a compatibility patch at this time.
Especially when I'm planning a complete rewrite of my mod in the near future, which may fix incompatibilities such as this without requiring specific checks.