The loops where you change the collision box sizes for all containers break any containers that are not 1x1. I'm assuming this is to allow the player to move among grids of containers, but you should limit the changes to your mod only.

We're still looking into it further for a server I am on with some streamers, but it sounds like Wezzernium may be right as it appears to be conflicting with the Warehousing Mod by Anoyomouse where any and all types of inserters, mini-loaders, bulk loaders no longer can insert nor extract items from warehouses.

Also breaks Angels warehouse and silo mods. So yes every store box with bigger that 1x1 footprint is broken.

I will look into this, sorry for breaking your other mods. I will probably just take it out

This issue should now be fixed with version 1.1.2, sorry it took so long to answer, I don't get notified when stuff is posted here and I try to check here often.