Tested it turning batch processing off. duplication issue is gone with that turned off.
things i would like to see with this mod : options to change these things :
read in Deadlocks "Stack size" Startup option and modify the recepies accordingly.
(aka 8 instead of 5)
read in "Batch stacking" options and multiply item input accordingly.
(if on multiply input by 4)
create a option to edit how many "layers" your mod provides
(default 8, maybe dropdown menu, or link it to the Stacksize option chosed above (more items less layers))