The mod that breaks my mod is "reverse factory". The way it works is that my mod searches the ingredients from a certain recipe. It then searches for fitting recipes which produce that ingredient. This however is vulnerable to infinite loops for example oil <- empty-oil-barrel -< fill-oil-barrel <- oil etc. Which I filter out.
Reverse factorio essentially adds a infinite loop for lots of items: assembler-2 <- iron-plate <- rt-assembler-2 <- assembler-2 which are filtered out. So not a single recipe is qualified so it displays nothing.
I will add this mod to the not compatible (for now) list.
Btw when providing a modlist please provide a zipfile with all the mods in it next time, it was a bit silly to manually install/enable every single one of them ;).