Okay, sorry this took so long - work has owned my soul...
To get your map fixed, you can run the following command:
/c game.player.game_view_settings.show_map_view_options = true
If you're on a server and want to get it back for everyone, use this command instead:
/c for _, p in pairs(game.players) do p.game_view_settings.show_map_view_options = true end
If you don't want to disable achievements or don't want to run commands from the internet, fair, just do the following:
- install the mod again
- open and close the map
- save
- uninstall the mod
I've changed the mod so that the flag to hide the map items is only set while the map is open, so there should be no issues with this in the future. However, anyone coming across this in the future, the likely case of what happened is your save occurred while the map was open, then you uninstalled EMOF. The above fix applies to you.