trying to sync mods is a really bad thing for me to try and do. I often work with development versions of the mods, definitely don't want the game deleting them just because you're using a different version, or not using the mod at all...
But that is also a very long list of mods, diagnosing it could take a long time...
However, I can see you have RitnLib installed.
Ritn REPLACES the base game ore generation system, and somehow manages to kill bobores. They're not compatible with each other.