Hi, i'm not used to pull requests so here's what I have, I haven't run into any missing resource messages in a while but I know both mods add rocks with specific resources in them, not sure if your mod labels those too:
-- Nullius
if script.active_mods['nullius'] then
addItem('nullius-bauxite', 'Bauxite', 'nullius-bauxite')
addItem('nullius-limestone', 'Limestone', 'nullius-limestone')
addItem('nullius-sandstone', 'Sandstone', 'nullius-sandstone')
addFluid('nullius-fumarole', 'Volcanic Gas', 'nullius-volcanic-gas')
end
-- Lambent nil
if script.active_mods['lambent-nil'] then
addItem('lambent-nil-phosphorite', 'Phosphorite', 'nullius-phosphorite')
end