Ive tested it down to vtk-deep-core-mining mod and when these two are together, the game crashes with this log (I sometimes also get error name iron-ore-patch)
2.138 Checksum of vtk-deep-core-mining: 2748441671
2.606 Error ModManager.cpp:957: Error in assignID, item with name 'copper-ore-patch' does not exist.
Source: invisible_rock_copper-ore-patch (simple-entity).
2.868 Loaded shader file O:/Games/Steam/steamapps/common/Factorio/data/core/graphics/shaders/game.glsl
2.869 Loaded shader file O:/Games/Steam/steamapps/common/Factorio/data/core/graphics/shaders/zoom-to-world.glsl
2.872 Initial atlas bitmap size is 16384
2.875 Created atlas bitmap 297x17
3.078 Sprites loaded
3.079 Custom inputs active: 2
3.107 Factorio initialised
3.108 Mods to disable:Failed to load mods: Error in assignID, item with name 'copper-ore-patch' does not exist.
Source: invisible_rock_copper-ore-patch (simple-entity).