Actually the problem happens when I start the game, so I guess it has nothing to do with the world, I play it on steam but I updated it using the installer I found on the official website. (and launched it directly so I don't have the "steam is preparing Factorio blahblah".) I'm using Windows 7 and apparently everything's up to date on it.
Well, to check what I've just written I started the game once again and... it actually worked so... I guess it's somehow fixed ^^' Well seems like you juste have to be patient.